Scalable and Robust Inference of Sparse Brain Signals via Personalized Physiological System Identification
| dc.contributor.advisor | Faghih, Rose T. | |
| dc.contributor.committeeMember | Hebert, Thomas J. | |
| dc.contributor.committeeMember | Prasad, Saurabh | |
| dc.contributor.committeeMember | Francis, Joseph T. | |
| dc.contributor.committeeMember | Reddy, Rohith K. | |
| dc.creator | AMIN, MD RAFIUL | |
| dc.creator.orcid | 0000-0003-4680-3071 | |
| dc.date.accessioned | 2022-06-18T00:18:43Z | |
| dc.date.created | December 2021 | |
| dc.date.issued | 2021-12 | |
| dc.date.submitted | December 2021 | |
| dc.date.updated | 2022-06-18T00:18:44Z | |
| dc.description.abstract | Electrodermal activities (EDA) are any electrical phenomena observed on the skin. Skin conductance (SC), a measure of EDA, shows fluctuations due to autonomic nervous system (ANS) activation induced sweat secretion. Since it can capture psychological and physiological information, there is a significant rise in the research for tracking mental and physiological health with SC recording. SC signal that is an observation of the EDA dynamics is representative of the class of signals generated by sparse dynamic systems. These signals can be deconvolved to uncover hidden variables. However, the current state-of-the-art of system theoretic deconvolution and consequent investigation has many challenges. The challenges include the need for a framework that incorporates prior physiological knowledge, the absence of a robust inference framework that can reliably fuse multichannel observations, and the non-convexity of the parameter estimation optimization problem. In addition to that, there is a lack of a comprehensive physiologically motivated model, the existing deconvolution method has poor scalability, and there is the presence of motion artifacts. Therefore, firstly, we model the fast varying fluctuations, i.e., the phasic component of SC using a two-dimensional state-space model representing the diffusion and evaporation processes of sweating with a sparse impulsive signal as the input representing ANS activation. We model the slowly varying fluctuation, i.e., the tonic component of SC with several cubic B-spline functions. We formulate an optimization problem with physiological priors on system parameters, a sparsity prior on the neural stimuli, and a smoothness prior on the tonic component. Finally, we employ a generalized cross-validation-based coordinate descent approach to balance the smoothness of the tonic component, the sparsity of the neural stimuli, and the residual. Secondly, we propose a model that combines multichannel SC recording that relates to the impulsive sparse ANS activation. Then we introduce a generalized cross validation-based deconvolution approach utilizing this model. Thirdly, we utilize the continuous system identification technique to reformulate the cost function as a convex one for the deconvolution problem. Fourthly, we propose a comprehensive model for the SC dynamics. The proposed model is a 3D state-space representation of the direct secretion of sweat via pore opening and diffusion followed by corresponding evaporation and reabsorption. The comprehensive model enables us to derive a scalable fixed interval smoother-based sparse deconvolution approach for scalable ANS activation inference. We incorporate generalized cross-validation to tune the sparsity level. Finally, we propose a motion artifact reduction scheme that leverages multiresolution linear/nonlinear adaptive filters and three-axis accelerometer-based motion reference. We further perform experiments to obtain the motion artifact contaminated data and the corresponding motion reference signal for validating the proposed scheme. For evaluation, we utilize both experimental, publicly available, and simulated datasets to investigate the performance of our proposed schemes. Our results show that our approach is successfully recovering ANS activation from SC recordings by addressing the existing challenges. Furthermore, we validate our approaches for reliability, robustness, and scalability by evaluating their event SC response detection performance. Finally, our results validate that our physiology-motivated state-space model can comprehensively explain the EDA dynamics and outperforms all previous approaches. Our findings introduce a whole new perspective and have a broader impact on the standard practices of EDA analysis and the analysis of similar systems with sparse dynamics. | |
| dc.description.department | Electrical and Computer Engineering, Department of | |
| dc.format.digitalOrigin | born digital | |
| dc.format.mimetype | application/pdf | |
| dc.identifier.citation | Portions of this document appear in: Amin, M.R. and Faghih, R.T., 2020. Identification of Sympathetic Nervous System Activation From Skin Conductance: A Sparse Decomposition Approach With Physiological Priors. IEEE Transactions on Biomedical Engineering, 68(5), pp.1726-1736; and in: Amin, M.R. and Faghih, R.T., 2019, July. Tonic and phasic decomposition of skin conductance data: A generalized-cross-validation-based block coordinate descent approach. In 2019 41st Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC) (pp. 745-749). IEEE; and in: Amin, M.R. and Faghih, R.T., 2018, October. Inferring autonomic nervous system stimulation from hand and foot skin conductance measurements. In 2018 52nd Asilomar Conference on Signals, Systems, and Computers (pp. 655-660). IEEE; and in: Amin, M.R. and Faghih, R.T., 2019. Robust inference of autonomic nervous system activation using skin conductance measurements: A multi-channel sparse system identification approach. IEEE Access, 7, pp.173419-173437; and in: Amin, M.R. and Faghih, R.T., 2019. Sparse deconvolution of electrodermal activity via continuous-time system identification. IEEE Transactions on Biomedical Engineering, 66(9), pp.2585-2595. | |
| dc.identifier.uri | https://hdl.handle.net/10657/9301 | |
| dc.language.iso | eng | |
| dc.rights | The author of this work is the copyright owner. UH Libraries and the Texas Digital Library have their permission to store and provide access to this work. UH Libraries has secured permission to reproduce any and all previously published materials contained in the work. Further transmission, reproduction, or presentation of this work is prohibited except with permission of the author(s). | |
| dc.subject | Biomedical Signal Processing | |
| dc.subject | Optimization | |
| dc.subject | Sparse Recovery | |
| dc.subject | Bayesian Filter | |
| dc.subject | State-Space | |
| dc.subject | Physiological Modeling | |
| dc.title | Scalable and Robust Inference of Sparse Brain Signals via Personalized Physiological System Identification | |
| dc.type.dcmi | Text | |
| dc.type.genre | Thesis | |
| dcterms.accessRights | The full text of this item is not available at this time because the student has placed this item under an embargo for a period of time. The Libraries are not authorized to provide a copy of this work during the embargo period. | |
| local.embargo.lift | 2023-12-01 | |
| local.embargo.terms | 2023-12-01 | |
| thesis.degree.college | Cullen College of Engineering | |
| thesis.degree.department | Electrical and Computer Engineering, Department of | |
| thesis.degree.discipline | Electrical Engineering | |
| thesis.degree.grantor | University of Houston | |
| thesis.degree.level | Doctoral | |
| thesis.degree.name | Doctor of Philosophy |
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